BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004A06SP1|AL425215
(834 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1166 1593 0.0
>3x_Contig1166
Length = 5040
Score = 1593 bits (800), Expect = 0.0
Identities = 811/818 (99%)
Strand = Plus / Plus
Query: 17 ggatctaaggtagcagttctactgaacgatcgataaatattacgatgggctttgaatccc 76
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2062 ggatctaaggtagcagttctactgaacgatcgataaatattacgatcggctttgaatccc 2121
Query: 77 acttctggtgcacaatattccggagtaccgaccacagtatgcattctttcttttgtattt 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2122 acttctggtgcacaatattccggagtaccgaccacagtatgcattctttcttttgtattt 2181
Query: 137 tgagataattcttttgcaataccaaaatctgcaagaacaaccttagtacatggttctggg 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2182 tgagataattcttttgcaataccaaaatctgcaagaacaaccttagtacatggttctggg 2241
Query: 197 gtatgcaagaggatattgtccaacttcaaatccctgtgaacgatgccgtttgaatgthag 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2242 gtatgcaagaggatattgtccaacttcaaatccctgtgaacgatgccgtttgaatgtaag 2301
Query: 257 awcttcaaagctaagagaatctgatatatgattatyaacgattctgtttcagaaatcgga 316
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2302 aacttcaaagctaagagaatctgatatatgattatcaacgattctgtttcagaaatcgga 2361
Query: 317 actaagcaatcgccttttgccaaataagagaagagatcacctcccgatataagatcctga 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2362 actaagcaatcgccttttgccaaataagagaagagatcacctcccgatataagatcctga 2421
Query: 377 aaaatgtatacattgccaagggcatcaacacaagattgatgaatacgaataatatttgga 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2422 aaaatgtatacattgccaagggcatcaacacaagattgatgaatacgaataatatttgga 2481
Query: 437 tgattcaatttttcaagaatggtggcttctttcaccatcctagtctttgcagtgttgata 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2482 tgattcaatttttcaagaatggtggcttctttcaccatcctagtctttgcagtgttgata 2541
Query: 497 acttttacagcatatgawacagtctttttagcaacttgtcttttcatattgtggtccact 556
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2542 acttttacagcatatgaaacagtctttttagcaacttgtcttttcatattgtggtccact 2601
Query: 557 ttttctgctaccaagacatgtccaaaagttcctgagcccactatacgcggcacaattttc 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2602 ttttctgctaccaagacatgtccaaaagttcctgagcccactatacgcggcacaattttc 2661
Query: 617 catcgatcccattccgatttaattctcaacccagttataaactgtgacatcgtttcgctt 676
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2662 catcgatcccattccgatttaattctcaacccagtcataaactgtgacatcgtttcgctt 2721
Query: 677 ttcactgcagagaacttaaattttgccccgtttggtaattgaatcacgtcttggttggat 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2722 ttcactgcagagaacttaaattttgccccgtttggtaattgaatcacgtcttggttggat 2781
Query: 737 aacaagtatgggacgtctctggataagacctgctcattgaccatcgtcccattcaatgac 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2782 aacaagtatgggacgtctctggataagacctgctcattgaccatcgtcccattcaatgac 2841
Query: 797 atatcctttatgtagcaaagtggamcgctctcgggatc 834
|||||||||||||||||||||||| |||||||||||||
Sbjct: 2842 atatcctttatgtagcaaagtggaacgctctcgggatc 2879
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6134
Number of Sequences: 1807
Number of extensions: 6134
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 834
length of database: 10,358,551
effective HSP length: 16
effective length of query: 818
effective length of database: 10,329,639
effective search space: 8449644702
effective search space used: 8449644702
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)